[INFO] fetching crate hdf5 0.7.0...
[INFO] checking hdf5-0.7.0 against master#af3c6e733a40e671550e0f0f5aeecaa13772ba56 for pr-74989
[INFO] extracting crate hdf5 0.7.0 into /workspace/builds/worker-7/source
[INFO] validating manifest of crates.io crate hdf5 0.7.0 on toolchain af3c6e733a40e671550e0f0f5aeecaa13772ba56
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+af3c6e733a40e671550e0f0f5aeecaa13772ba56" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate hdf5 0.7.0
[INFO] finished tweaking crates.io crate hdf5 0.7.0
[INFO] tweaked toml for crates.io crate hdf5 0.7.0 written to /workspace/builds/worker-7/source/Cargo.toml
[INFO] crate crates.io crate hdf5 0.7.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+af3c6e733a40e671550e0f0f5aeecaa13772ba56" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+af3c6e733a40e671550e0f0f5aeecaa13772ba56" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] d9e39f1bd4f607704a98161b0edff174a150d7ec6fc6bff3ad0e6a1739bd880a
[INFO] running `Command { std: "docker" "start" "-a" "d9e39f1bd4f607704a98161b0edff174a150d7ec6fc6bff3ad0e6a1739bd880a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d9e39f1bd4f607704a98161b0edff174a150d7ec6fc6bff3ad0e6a1739bd880a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d9e39f1bd4f607704a98161b0edff174a150d7ec6fc6bff3ad0e6a1739bd880a", kill_on_drop: false }`
[INFO] [stdout] d9e39f1bd4f607704a98161b0edff174a150d7ec6fc6bff3ad0e6a1739bd880a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+af3c6e733a40e671550e0f0f5aeecaa13772ba56" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 57f659c5f567abc6365b47e66bc61a32e0e61e488f37ab8633c0dd436c668976
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "57f659c5f567abc6365b47e66bc61a32e0e61e488f37ab8633c0dd436c668976", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.68
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]     Checking cfg-if v0.1.10
[INFO] [stderr]    Compiling libloading v0.6.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling regex-syntax v0.6.17
[INFO] [stderr]    Compiling getrandom v0.1.14
[INFO] [stderr]    Compiling proc-macro2 v1.0.10
[INFO] [stderr]    Compiling unicode-xid v0.2.0
[INFO] [stderr]    Compiling syn v1.0.17
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling proc-macro-hack-impl v0.4.2
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]     Checking smallvec v1.3.0
[INFO] [stderr]    Compiling ndarray v0.13.0
[INFO] [stderr]     Checking ppv-lite86 v0.2.6
[INFO] [stderr]    Compiling hdf5 v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Checking ascii v1.0.0
[INFO] [stderr]     Checking remove_dir_all v0.5.2
[INFO] [stderr]     Checking ansi_term v0.11.0
[INFO] [stderr]     Checking difference v2.0.0
[INFO] [stderr]    Compiling num-integer v0.1.42
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]     Checking itertools v0.8.2
[INFO] [stderr]     Checking lock_api v0.3.4
[INFO] [stderr]     Checking pretty_assertions v0.6.1
[INFO] [stderr]    Compiling proc-macro-hack v0.4.2
[INFO] [stderr]    Compiling aho-corasick v0.7.10
[INFO] [stderr]    Compiling quote v1.0.3
[INFO] [stderr]     Checking parking_lot_core v0.7.1
[INFO] [stderr]     Checking rand v0.4.6
[INFO] [stderr]     Checking hdf5-types v0.7.0
[INFO] [stderr]    Compiling mashup-impl v0.1.9
[INFO] [stderr]     Checking rand_core v0.5.1
[INFO] [stderr]     Checking parking_lot v0.10.2
[INFO] [stderr]     Checking rand_pcg v0.2.1
[INFO] [stderr]     Checking rand_chacha v0.2.2
[INFO] [stderr]     Checking rand v0.7.3
[INFO] [stderr]     Checking mashup v0.1.9
[INFO] [stderr]     Checking tempdir v0.3.7
[INFO] [stderr]    Compiling regex v1.3.6
[INFO] [stderr]    Compiling hdf5-sys v0.7.0
[INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-5425c6a43b5de830/build-script-build` (exit code: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   Attempting to find HDF5 via pkg-config...
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x55f3a6bfaf50 - std::backtrace_rs::backtrace::libunwind::trace::h452faf99f32e7c93
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/../../backtrace/src/backtrace/libunwind.rs:96
[INFO] [stderr]      1:     0x55f3a6bfaf50 - std::backtrace_rs::backtrace::trace_unsynchronized::he40edc71437667a1
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/../../backtrace/src/backtrace/mod.rs:66
[INFO] [stderr]      2:     0x55f3a6bfaf50 - std::sys_common::backtrace::_print_fmt::h6c51d6ade71f46bf
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/sys_common/backtrace.rs:79
[INFO] [stderr]      3:     0x55f3a6bfaf50 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::h3cd15d7003dec37a
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/sys_common/backtrace.rs:58
[INFO] [stderr]      4:     0x55f3a6c19b0c - core::fmt::write::h1857a60b204f1b6a
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/core/src/fmt/mod.rs:1080
[INFO] [stderr]      5:     0x55f3a6bf7fe7 - std::io::Write::write_fmt::hac61caff894c35ae
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/io/mod.rs:1517
[INFO] [stderr]      6:     0x55f3a6bfd1d0 - std::sys_common::backtrace::_print::haa2f390fb7957e3e
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/sys_common/backtrace.rs:61
[INFO] [stderr]      7:     0x55f3a6bfd1d0 - std::sys_common::backtrace::print::h48c7cbbad9013bb1
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/sys_common/backtrace.rs:48
[INFO] [stderr]      8:     0x55f3a6bfd1d0 - std::panicking::default_hook::{{closure}}::h8b7ff05a31e71d55
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/panicking.rs:208
[INFO] [stderr]      9:     0x55f3a6bfcf1c - std::panicking::default_hook::h2f00c78800d98e4c
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/panicking.rs:227
[INFO] [stderr]     10:     0x55f3a6bfd833 - std::panicking::rust_panic_with_hook::h4eaa635e4694aef3
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/panicking.rs:577
[INFO] [stderr]     11:     0x55f3a69fef4c - std::panicking::begin_panic::{{closure}}::h607a56226a55bbc9
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/panicking.rs:506
[INFO] [stderr]     12:     0x55f3a69e99b9 - std::sys_common::backtrace::__rust_end_short_backtrace::h395439f6182f7d1c
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/sys_common/backtrace.rs:153
[INFO] [stderr]     13:     0x55f3a69fee77 - std::panicking::begin_panic::hc5d04cca843b5caf
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/panicking.rs:505
[INFO] [stderr]     14:     0x55f3a69d027a - build_script_build::LibrarySearcher::try_locate_hdf5_library::h962097d6fe17d0d5
[INFO] [stderr]                                  at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549
[INFO] [stderr]     15:     0x55f3a69d1bbc - build_script_build::main::h6e3a62e69f33e456
[INFO] [stderr]                                  at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647
[INFO] [stderr]     16:     0x55f3a69d8acb - core::ops::function::FnOnce::call_once::h72dec93fa40f6e25
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/core/src/ops/function.rs:227
[INFO] [stderr]     17:     0x55f3a69d628e - std::sys_common::backtrace::__rust_begin_short_backtrace::h763c09d9ab66dc17
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/sys_common/backtrace.rs:137
[INFO] [stderr]     18:     0x55f3a69d8421 - std::rt::lang_start::{{closure}}::hc2bb5ac272835505
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/rt.rs:66
[INFO] [stderr]     19:     0x55f3a6bfdc31 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::hecc21eb9018cc197
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/core/src/ops/function.rs:259
[INFO] [stderr]     20:     0x55f3a6bfdc31 - std::panicking::try::do_call::h174ad655d084b5c7
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/panicking.rs:381
[INFO] [stderr]     21:     0x55f3a6bfdc31 - std::panicking::try::h479e6054ce28de10
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/panicking.rs:345
[INFO] [stderr]     22:     0x55f3a6bfdc31 - std::panic::catch_unwind::hb558ddea2b3e9c45
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/panic.rs:382
[INFO] [stderr]     23:     0x55f3a6bfdc31 - std::rt::lang_start_internal::h163149047f0a8b61
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/rt.rs:51
[INFO] [stderr]     24:     0x55f3a69d83f7 - std::rt::lang_start::h5dbce65ad8d36ebf
[INFO] [stderr]                                  at /rustc/af3c6e733a40e671550e0f0f5aeecaa13772ba56/library/std/src/rt.rs:65
[INFO] [stderr]     25:     0x55f3a69d32ea - main
[INFO] [stderr]     26:     0x7f2eb86e00b3 - __libc_start_main
[INFO] [stderr]     27:     0x55f3a69cb0be - _start
[INFO] [stderr]     28:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "57f659c5f567abc6365b47e66bc61a32e0e61e488f37ab8633c0dd436c668976", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "57f659c5f567abc6365b47e66bc61a32e0e61e488f37ab8633c0dd436c668976", kill_on_drop: false }`
[INFO] [stdout] 57f659c5f567abc6365b47e66bc61a32e0e61e488f37ab8633c0dd436c668976
